SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300151
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr4:7805179-7941978
Size: 136799
Super-enhancer rank 151
Number of SE elements: 31
ChIP density(Case|Control): 81518.5241|10875.5205
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC389199 ;
ROSE Overlap LOC389199 ; AFAP1 ;
ROSE Proximal AFAP1 ;
ROSE Closest LOC389199 ;
Lasso ;
PreSTIGE ;
ABC AFAP1 ; ABLIM2 ; HTRA3 ; LOC389199 ; AFAP1-AS1 ; SH3TC1 ; FLJ36777 ; SORCS2 ; PSAPL1 ; TRMT44 ; ACOX3 ; CPZ ; KIAA0232 ; LOC105374366 ; MRFAP1 ; TADA2B ; GRPEL1 ; TBC1D14 ; CCDC96 ; LOC93622 ; MRFAP1L1 ; MAN2B2 ; BLOC1S4 ; CRMP1 ; WFS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300151 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers