SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300090
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr9:21541985-21594183
Size: 52198
Super-enhancer rank 90
Number of SE elements: 11
ChIP density(Case|Control): 96837.7296|5840.9562
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR31HG ;
ROSE Overlap MIR31HG ;
ROSE Proximal MIR31 ;
ROSE Closest MIR31HG ;
Lasso ;
PreSTIGE ;
ABC DMRTA1 ; LINC01239 ; MTAP ; CDKN2A ; KLHL9 ; HACD4 ; MIR31HG ; CDKN2B ; FOCAD-AS1 ; MLLT3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300090 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers