SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269300067
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr19:13831513-13854479
Size: 22966
Super-enhancer rank 67
Number of SE elements: 1
ChIP density(Case|Control): 103861.4384|1501.9764
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR23A ;
ROSE Overlap ZSWIM4 ; LOC284454 ; MIR24-2 ; MIR27A ; MIR23A ;
ROSE Proximal NANOS3 ; MIR181D ; MIR181C ;
ROSE Closest MIR23A ;
Lasso ;
PreSTIGE ;
ABC CCDC130 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300067 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers