SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300015
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr4:13885677-13935868
Size: 50191
Super-enhancer rank 15
Number of SE elements: 9
ChIP density(Case|Control): 189701.9036|5209.8258
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01085 ;
ROSE Overlap LINC01182 ;
ROSE Proximal ;
ROSE Closest LINC01085 ;
Lasso ;
PreSTIGE ;
ABC CC2D2A ; CPEB2 ; CPEB2-AS1 ; LINC01085 ; LINC01182 ; BOD1L1 ; NKX3-2 ; RAB28 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300015 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers