SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269201299
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr6:8079710-8089869
Size: 10159
Super-enhancer rank 1299
Number of SE elements: 2
ChIP density(Case|Control): 19400.6423|838.1175
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCARNA27 ;
ROSE Overlap EEF1E1-BLOC1S5 ; EEF1E1 ; SCARNA27 ;
ROSE Proximal BLOC1S5-TXNDC5 ;
ROSE Closest SCARNA27 ;
Lasso ;
PreSTIGE ;
ABC LOC100506207 ; SLC35B3 ; EEF1E1 ; EEF1E1-BLOC1S5 ; BLOC1S5 ; BLOC1S5-TXNDC5 ; TXNDC5 ; BMP6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269201299 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers