SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269201237
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr5:42984255-43010383
Size: 26128
Super-enhancer rank 1237
Number of SE elements: 3
ChIP density(Case|Control): 21466.7648|2254.8464
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FLJ32255 ;
ROSE Overlap FLJ32255 ;
ROSE Proximal LOC153684 ; ANXA2R ; LOC648987 ;
ROSE Closest FLJ32255 ;
Lasso ;
PreSTIGE ;
ABC FLJ32255 ; LOC648987 ; LOC100132356 ; LOC100506639 ; LOC153684 ; GHR ; CCDC152 ; ZNF131 ; ANXA2R ; PAIP1 ; TMEM267 ; NIM1K ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269201237 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers