SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269201192
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr4:38159703-38163994
Size: 4291
Super-enhancer rank 1192
Number of SE elements: 1
ChIP density(Case|Control): 19984.9034|402.4958
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D1 ;
ROSE Overlap ;
ROSE Proximal TBC1D1 ;
ROSE Closest TBC1D1 ;
Lasso ;
PreSTIGE ;
ABC FAM114A1 ; TLR6 ; KLHL5 ; LOC439933 ; ARAP2 ; RELL1 ; TLR1 ; TLR10 ; KLF3-AS1 ; KLF3 ; PGM2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269201192 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers