SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269201060
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr17:41047559-41065239
Size: 17680
Super-enhancer rank 1060
Number of SE elements: 4
ChIP density(Case|Control): 21691.592|800.904
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRTAP2-2 ;
ROSE Overlap KRTAP9-7 ; KRTAP2-4 ; KRTAP2-3 ; KRTAP2-2 ;
ROSE Proximal KRTAP1-5 ; KRTAP2-1 ; KRTAP3-2 ; KRTAP1-1 ; KRTAP1-3 ; KRTAP4-9 ; KRTAP3-1 ; KRTAP4-8 ; KRTAP1-4 ; KRTAP4-7 ;
ROSE Closest KRTAP2-2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269201060 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers