SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269201045
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr19:41218456-41234966
Size: 16510
Super-enhancer rank 1045
Number of SE elements: 3
ChIP density(Case|Control): 22446.996|1309.243
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AXL ;
ROSE Overlap AXL ;
ROSE Proximal HNRNPUL1 ; CYP2S1 ;
ROSE Closest AXL ;
Lasso ;
PreSTIGE ;
ABC NUMBL ; COQ8B ; ITPKC ; CYP2T1P ; EGLN2 ; SNRPA ; C19orf54 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269201045 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers