SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269201005
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr8:125212535-125233231
Size: 20696
Super-enhancer rank 1005
Number of SE elements: 5
ChIP density(Case|Control): 23328.5312|1734.3248
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NSMCE2 ;
ROSE Overlap NSMCE2 ;
ROSE Proximal ;
ROSE Closest NSMCE2 ;
Lasso ;
PreSTIGE ;
ABC FER1L6-AS1 ; LOC101927588 ; TMEM65 ; TRMT12 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269201005 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers