SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269201002
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr20:19964313-19994923
Size: 30610
Super-enhancer rank 1002
Number of SE elements: 5
ChIP density(Case|Control): 24365.56|2727.351
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NAA20 ;
ROSE Overlap RIN2 ;
ROSE Proximal NAA20 ;
ROSE Closest NAA20 ;
Lasso ;
PreSTIGE ;
ABC KIZ ; CFAP61 ; NAA20 ; RIN2 ; LINC00652 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269201002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers