SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269200932
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr1:45243400-45274327
Size: 30927
Super-enhancer rank 932
Number of SE elements: 5
ChIP density(Case|Control): 25746.7275|3108.1635
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01144 ;
ROSE Overlap ;
ROSE Proximal LINC01144 ; ZSWIM5 ;
ROSE Closest LINC01144 ;
Lasso ;
PreSTIGE ;
ABC KIF2C ; RPS8 ; BEST4 ; PLK3 ; TCTEX1D4 ; BTBD19 ; PTCH2 ; EIF2B3 ; HECTD3 ; UROD ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200932 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers