SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269200865
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr12:1559360-1625809
Size: 66449
Super-enhancer rank 865
Number of SE elements: 18
ChIP density(Case|Control): 33197.9204|9415.8233
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FBXL14 ;
ROSE Overlap WNT5B ; FBXL14 ;
ROSE Proximal MIR3649 ; WNT5B ;
ROSE Closest FBXL14 ;
Lasso ;
PreSTIGE ;
ABC ERC1 ; WNK1 ; LOC100049716 ; CCDC77 ; KDM5A ; ADIPOR2 ; LINC00940 ; SLC6A13 ; CACNA1C-AS1 ; DCP1B ; RAD52 ; CACNA1C ; FBXL14 ; LINC00942 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200865 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers