SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269200835
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr2:47061945-47091838
Size: 29893
Super-enhancer rank 835
Number of SE elements: 5
ChIP density(Case|Control): 27313.2341|3055.0646
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C2ORF61 ;
ROSE Overlap TTC7A ; C2orf61 ;
ROSE Proximal ;
ROSE Closest C2orf61 ;
Lasso ;
PreSTIGE ;
ABC LINC01119 ; MCFD2 ; SOCS5 ; CRIPT ; PIGF ; EPAS1 ; ATP6V1E2 ; RHOQ ; TTC7A ; LOC101927043 ; MSH2 ; MSH6 ; FBXO11 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200835 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers