SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269200537
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr19:13118973-13172969
Size: 53996
Super-enhancer rank 537
Number of SE elements: 8
ChIP density(Case|Control): 35016.406|4136.0936
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: STX10 ;
ROSE Overlap NACC1 ; IER2 ; STX10 ;
ROSE Proximal LYL1 ; TRMT1 ;
ROSE Closest STX10 ;
Lasso ;
PreSTIGE ;
ABC NFIX ; TRMT1 ; RAD23A ; NACC1 ; GADD45GIP1 ; FARSA ; CALR ; SYCE2 ; DNASE2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200537 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers