SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269200300
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr1:205258080-205325569
Size: 67489
Super-enhancer rank 300
Number of SE elements: 10
ChIP density(Case|Control): 49307.4634|6546.433
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUAK2 ;
ROSE Overlap TMCC2 ; NUAK2 ;
ROSE Proximal DSTYK ; LEMD1-AS1 ; KLHDC8A ;
ROSE Closest NUAK2 ;
Lasso ;
PreSTIGE ;
ABC NUAK2 ; LEMD1-AS1 ; TMCC2 ; KLHDC8A ; SLC45A3 ; ELK4 ; NFASC ; RBBP5 ; DSTYK ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200300 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers