SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269200100
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr9:37994438-38074738
Size: 80300
Super-enhancer rank 100
Number of SE elements: 16
ChIP density(Case|Control): 83431.7|9660.09
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SHB ;
ROSE Overlap SHB ;
ROSE Proximal ;
ROSE Closest SHB ;
Lasso ;
PreSTIGE ;
ABC FAM201A ; SHB ; SLC25A51 ; DCAF10 ; EXOSC3 ; ALDH1B1 ; ANKRD18A ; FBXO10 ; TRMT10B ; TOMM5 ; EBLN3P ; ZCCHC7 ; GRHPR ; POLR1E ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200100 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers