SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269200008
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-WT (IDH1-R132H)
Genomic region: chr3:170688046-170767833
Size: 79787
Super-enhancer rank 8
Number of SE elements: 11
ChIP density(Case|Control): 213302.5658|10045.1833
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC7A14 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest SLC7A14 ;
Lasso ;
PreSTIGE ;
ABC TNIK ; EIF5A2 ; RPL22L1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269200008 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers