SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269101165
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr6:26295146-26352648
Size: 57502
Super-enhancer rank 1165
Number of SE elements: 9
ChIP density(Case|Control): 28296.7342|5652.4466
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H4H ;
ROSE Overlap ;
ROSE Proximal BTN3A2 ; HIST1H2BH ; HIST1H4G ; BTN2A2 ; HIST1H3G ; HIST1H2BI ; HIST1H4H ; BTN3A1 ; HIST1H3F ;
ROSE Closest HIST1H4H ;
Lasso ;
PreSTIGE ;
ABC BTN3A2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269101165 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers