SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269100623
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr11:33688372-33754017
Size: 65645
Super-enhancer rank 623
Number of SE elements: 9
ChIP density(Case|Control): 38074.1|5258.1645
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CD59 ;
ROSE Overlap CD59 ; FBXO3 ; C11orf91 ;
ROSE Proximal FBXO3-AS1 ;
ROSE Closest CD59 ;
Lasso ;
PreSTIGE ;
ABC QSER1 ; DEPDC7 ; TCP11L1 ; CSTF3 ; CSTF3-AS1 ; HIPK3 ; C11orf91 ; CD59 ; FBXO3 ; FBXO3-AS1 ; LMO2 ; CAPRIN1 ; NAT10 ; CAT ; EIF3M ; PRRG4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100623 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers