SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269100613
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr8:38880970-38938386
Size: 57416
Super-enhancer rank 613
Number of SE elements: 6
ChIP density(Case|Control): 38560.5856|5368.396
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLEKHA2 ;
ROSE Overlap PLEKHA2 ;
ROSE Proximal HTRA4 ;
ROSE Closest PLEKHA2 ;
Lasso ;
PreSTIGE ;
ABC TM2D2 ; ADAM32 ; ADAM9 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100613 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers