SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269100454
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr18:11848847-11860920
Size: 12073
Super-enhancer rank 454
Number of SE elements: 1
ChIP density(Case|Control): 40619.6085|1010.5101
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GNAL ;
ROSE Overlap GNAL ; CHMP1B ;
ROSE Proximal MPPE1 ;
ROSE Closest GNAL ;
Lasso ;
PreSTIGE ;
ABC MPPE1 ; CHMP1B ; IMPA2 ; LDLRAD4 ; AFG3L2 ; TUBB6 ; CIDEA ; PRELID3A ; SPIRE1 ; CEP76 ; PSMG2 ; APCDD1 ; PTPN2 ; SEH1L ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100454 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers