SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269100448
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr1:205258265-205325557
Size: 67292
Super-enhancer rank 448
Number of SE elements: 11
ChIP density(Case|Control): 46963.0868|7079.1184
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUAK2 ;
ROSE Overlap TMCC2 ; NUAK2 ;
ROSE Proximal DSTYK ; LEMD1-AS1 ; KLHDC8A ;
ROSE Closest NUAK2 ;
Lasso ;
PreSTIGE ;
ABC NUAK2 ; LEMD1-AS1 ; TMCC2 ; KLHDC8A ; SLC45A3 ; ELK4 ; NFASC ; RBBP5 ; DSTYK ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100448 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers