SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269100400
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr17:40484960-40558340
Size: 73380
Super-enhancer rank 400
Number of SE elements: 13
ChIP density(Case|Control): 49399.416|7132.536
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNS4 ;
ROSE Overlap CCR7 ; TNS4 ;
ROSE Proximal CCR7 ; IGFBP4 ;
ROSE Closest TNS4 ;
Lasso ;
PreSTIGE ;
ABC STAT3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100400 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers