SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269100259
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr1:218657845-218720406
Size: 62561
Super-enhancer rank 259
Number of SE elements: 11
ChIP density(Case|Control): 60671.6578|7513.5761
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGFB2-OT1 ;
ROSE Overlap MIR548F3 ;
ROSE Proximal ;
ROSE Closest TGFB2-OT1 ;
Lasso ;
PreSTIGE ;
ABC TGFB2 ; TGFB2-AS1 ; MIR548F3 ; EPRS ; LYPLAL1 ; LYPLAL1-AS1 ; SPATA17 ; RRP15 ; BPNT1 ; RAB3GAP2 ; IARS2 ; ESRRG ; GPATCH2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100259 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers