SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269100123
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr1:156096004-156130921
Size: 34917
Super-enhancer rank 123
Number of SE elements: 4
ChIP density(Case|Control): 77327.1882|3544.0755
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LMNA ;
ROSE Overlap LMNA ;
ROSE Proximal LAMTOR2 ; RAB25 ; UBQLN4 ; SEMA4A ; LMNA ; MEX3A ;
ROSE Closest LMNA ;
Lasso ;
PreSTIGE ;
ABC BGLAP ; PMF1 ; PMF1-BGLAP ; LMNA ; MEX3A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100123 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers