SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269100114
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr1:172858791-172948537
Size: 89746
Super-enhancer rank 114
Number of SE elements: 12
ChIP density(Case|Control): 87098.493|11083.631
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFSF18 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest TNFSF18 ;
Lasso ;
PreSTIGE ;
ABC TNFSF18 ; TNFSF4 ; ANKRD45 ; KLHL20 ; LOC100506023 ; PRDX6 ; CENPL ; DARS2 ; GAS5 ; ZBTB37 ; PIGC ; LOC102724601 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100114 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers