SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269100108
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-WT)
Genomic region: chr12:12714087-12742168
Size: 28081
Super-enhancer rank 108
Number of SE elements: 5
ChIP density(Case|Control): 80499.8027|3212.4664
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: APOLD1 ;
ROSE Overlap CDKN1B ; APOLD1 ;
ROSE Proximal MIR613 ; APOLD1 ; GPR19 ;
ROSE Closest APOLD1 ;
Lasso ;
PreSTIGE ;
ABC DUSP16 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269100108 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers