SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_250900321
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ascites
Biosample name: OCI_LY3_24h_r1
Genomic region: chr1:40690729-40714152
Size: 23423
Super-enhancer rank 321
Number of SE elements: 7
ChIP density(Case|Control): 54795.7662|2314.1924
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NFYC ;
ROSE Overlap NFYC ; NFYC-AS1 ;
ROSE Proximal NFYC ; MIR30E ; MIR30C1 ; RIMS3 ;
ROSE Closest NFYC ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_250900321 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers