SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_250900227
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ascites
Biosample name: OCI_LY3_24h_r1
Genomic region: chr12:6423656-6435231
Size: 11575
Super-enhancer rank 227
Number of SE elements: 1
ChIP density(Case|Control): 66632.645|2390.2375
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CD27 ;
ROSE Overlap ;
ROSE Proximal LTBR ; VAMP1 ; CD27 ; SCNN1A ; TAPBPL ; CD27-AS1 ;
ROSE Closest CD27 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_250900227 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers