SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_250900209
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ascites
Biosample name: OCI_LY3_24h_r1
Genomic region: chr1:28126330-28183526
Size: 57196
Super-enhancer rank 209
Number of SE elements: 12
ChIP density(Case|Control): 73771.4008|5650.9648
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTAFR ;
ROSE Overlap PTAFR ;
ROSE Proximal PTAFR ; EYA3 ; DNAJC8 ;
ROSE Closest PTAFR ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_250900209 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers