SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_250900086
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ascites
Biosample name: OCI_LY3_24h_r1
Genomic region: chr13:30394363-30477977
Size: 83614
Super-enhancer rank 86
Number of SE elements: 16
ChIP density(Case|Control): 112477.5528|14038.7906
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01058 ;
ROSE Overlap LINC01058 ; HMGB1 ;
ROSE Proximal LINC00426 ;
ROSE Closest LINC01058 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_250900086 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers