SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_250900085
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ascites
Biosample name: OCI_LY3_24h_r1
Genomic region: chr9:120891046-120945073
Size: 54027
Super-enhancer rank 85
Number of SE elements: 12
ChIP density(Case|Control): 105087.9177|6088.8429
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAF1 ;
ROSE Overlap PHF19 ; TRAF1 ;
ROSE Proximal PHF19 ; PSMD5-AS1 ; PSMD5 ;
ROSE Closest TRAF1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_250900085 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers