SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_244100440
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: LP-1_DMSO_4h
Genomic region: chr9:129884314-129913398
Size: 29084
Super-enhancer rank 440
Number of SE elements: 34
ChIP density(Case|Control): 22711.6956|2899.6748
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: USP20 ;
ROSE Overlap FNBP1 ;
ROSE Proximal USP20 ; MIR6855 ; C9orf78 ;
ROSE Closest MIR6855 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_244100440 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers