SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_244100408
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: LP-1_DMSO_4h
Genomic region: chr1:161173084-161194924
Size: 21840
Super-enhancer rank 408
Number of SE elements: 14
ChIP density(Case|Control): 25530.96|4616.976
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: B4GALT3 ;
ROSE Overlap ADAMTS4 ; B4GALT3 ;
ROSE Proximal FCER1G ; DEDD ; MIR5187 ; NDUFS2 ; TOMM40L ; PPOX ; USP21 ; UFC1 ; APOA2 ; NR1I3 ; B4GALT3 ;
ROSE Closest B4GALT3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_244100408 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers