SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_243600439
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: tumor
Biosample name: SKNMC, OE, NFIB, wt
Genomic region: chr17:40303387-40323572
Size: 20185
Super-enhancer rank 439
Number of SE elements: 8
ChIP density(Case|Control): 20857.1605|1978.13
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RARA ;
ROSE Overlap RARA ;
ROSE Proximal RARA-AS1 ; RARA ; CDC6 ; GJD3 ;
ROSE Closest RARA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_243600439 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers