SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_243600239
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: tumor
Biosample name: SKNMC, OE, NFIB, wt
Genomic region: chr3:195182259-195225127
Size: 42868
Super-enhancer rank 239
Number of SE elements: 13
ChIP density(Case|Control): 31357.942|5714.3044
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: XXYLT1 ;
ROSE Overlap XXYLT1 ;
ROSE Proximal MIR3137 ; XXYLT1-AS2 ;
ROSE Closest XXYLT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_243600239 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers