SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_242400259
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562 cell line rep1
Genomic region: chr19:12777815-12796567
Size: 18752
Super-enhancer rank 259
Number of SE elements: 7
ChIP density(Case|Control): 37376.4864|7028.2496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5684 ;
ROSE Overlap JUNB ; MIR5684 ;
ROSE Proximal BEST2 ; RTBDN ; ASNA1 ; HOOK2 ; RNASEH2A ; PRDX2 ; C19orf43 ; MAST1 ;
ROSE Closest MIR5684 ;
Lasso ;
PreSTIGE ;
ABC MAN2B1 ; WDR83 ; WDR83OS ; DHPS ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_242400259 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers