SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_238800769
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: tumor
Biosample name: 1033
Genomic region: chr3:9395183-9403109
Size: 7926
Super-enhancer rank 769
Number of SE elements: 3
ChIP density(Case|Control): 15909.8598|871.0674
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SETD5 ;
ROSE Overlap SETD5 ; THUMPD3-AS1 ;
ROSE Proximal THUMPD3 ; SETD5 ;
ROSE Closest SETD5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_238800769 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers