SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_238800473
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: tumor
Biosample name: 1033
Genomic region: chr1_GL383519v1_alt:4228-82905
Size: 78677
Super-enhancer rank 473
Number of SE elements: 26
ChIP density(Case|Control): 23650.3062|3941.7177
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap MTX1 ; HCN3 ; CLK2 ; GBA ; GBAP1 ; SCAMP3 ; FAM189B ;
ROSE Proximal ;
ROSE Closest MTX1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_238800473 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers