SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_238701525
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: tumor
Biosample name: 924-1
Genomic region: chr3:48424844-48436583
Size: 11739
Super-enhancer rank 1525
Number of SE elements: 2
ChIP density(Case|Control): 12628.8162|1087.0314
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXNB1 ;
ROSE Overlap PLXNB1 ; CCDC51 ;
ROSE Proximal TMA7 ; ATRIP ; CCDC51 ; SHISA5 ; TREX1 ;
ROSE Closest PLXNB1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_238701525 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers