SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_238701243
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: tumor
Biosample name: 924-1
Genomic region: chr3:50150075-50171265
Size: 21190
Super-enhancer rank 1243
Number of SE elements: 10
ChIP density(Case|Control): 14792.739|1699.438
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEMA3F ;
ROSE Overlap SEMA3F ;
ROSE Proximal RBM5-AS1 ; GNAT1 ; MIR566 ; SLC38A3 ;
ROSE Closest SEMA3F ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_238701243 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers