SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_238700910
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: tumor
Biosample name: 924-1
Genomic region: chr19:35109365-35131553
Size: 22188
Super-enhancer rank 910
Number of SE elements: 7
ChIP density(Case|Control): 17424.2364|1837.1664
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6887 ;
ROSE Overlap LGI4 ; FXYD3 ; MIR6887 ;
ROSE Proximal FXYD1 ; FXYD5 ; FXYD3 ; FXYD7 ; HPN-AS1 ;
ROSE Closest MIR6887 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_238700910 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers