SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_238700906
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: tumor
Biosample name: 924-1
Genomic region: chr1:40612577-40669027
Size: 56450
Super-enhancer rank 906
Number of SE elements: 19
ChIP density(Case|Control): 20468.77|4865.99
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RIMS3 ;
ROSE Overlap RIMS3 ;
ROSE Proximal NFYC ; NFYC-AS1 ;
ROSE Closest RIMS3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_238700906 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers