SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_234000543
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.untreated.R1
Genomic region: chr19:45428477-45456887
Size: 28410
Super-enhancer rank 543
Number of SE elements: 9
ChIP density(Case|Control): 9207.681|2434.737
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6088 ;
ROSE Overlap MIR6088 ;
ROSE Proximal CD3EAP ; PPP1R13L ; PPM1N ; FOSB ; ERCC1 ; RTN2 ;
ROSE Closest MIR6088 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_234000543 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers