SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_233801010
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.DMSO.R1
Genomic region: chr2:158456275-158459201
Size: 2926
Super-enhancer rank 1010
Number of SE elements: 1
ChIP density(Case|Control): 10810.107|229.3984
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PKP4 ;
ROSE Overlap CCDC148 ; PKP4 ;
ROSE Proximal PKP4 ;
ROSE Closest PKP4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_233801010 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers