SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_233800978
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.DMSO.R1
Genomic region: chr19:42269177-42281834
Size: 12657
Super-enhancer rank 978
Number of SE elements: 5
ChIP density(Case|Control): 12016.5558|1146.7242
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CIC ;
ROSE Overlap CIC ;
ROSE Proximal PAFAH1B3 ; GSK3A ; ZNF526 ; PRR19 ; ERF ; MEGF8 ; DEDD2 ; CIC ; TMEM145 ;
ROSE Closest CIC ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_233800978 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers