SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_233800946
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.DMSO.R1
Genomic region: chr19:55112087-55116316
Size: 4229
Super-enhancer rank 946
Number of SE elements: 2
ChIP density(Case|Control): 11446.6343|353.5444
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R12C ;
ROSE Overlap PPP1R12C ;
ROSE Proximal PPP1R12C ; RDH13 ; TNNI3 ; EPS8L1 ; MIR7975 ; TNNT1 ;
ROSE Closest PPP1R12C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_233800946 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers