SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_233800572
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.DMSO.R1
Genomic region: chr3:8482868-8510512
Size: 27644
Super-enhancer rank 572
Number of SE elements: 7
ChIP density(Case|Control): 18192.5164|2512.8396
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LMCD1-AS1 ;
ROSE Overlap LMCD1 ; LMCD1-AS1 ;
ROSE Proximal LMCD1 ;
ROSE Closest LMCD1-AS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_233800572 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers