SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_233800418
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.DMSO.R1
Genomic region: chr20:41307720-41330631
Size: 22911
Super-enhancer rank 418
Number of SE elements: 6
ChIP density(Case|Control): 21756.2856|3099.8583
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZHX3 ;
ROSE Overlap ;
ROSE Proximal LPIN3 ; EMILIN3 ; ZHX3 ;
ROSE Closest ZHX3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_233800418 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers